CoffeeDNA » Microsatellites?

This database features has the largest collection coffea specific simple sequence repeats with the detailed information on SSR development, SSR primers, genotyping etc. Click on the links (left menu) to explore further.

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SSR Primer DB features the list of the Microsatellite primers with the PCR conditions and related info

SSR sequence DB features sequences with repeat motif and related info.

What are Microsatellites?

Microsatellite or Simple sequence repeat (SSR) are tandem repeated nucleotide sequences ranging from 1-6 base pair long that very in repeat motifs and are flanked by conserved DNA sequences. Due to codominant nature, stability, abundancy, sensitivity, suitability for automation and its flexibility, microsatellite is considered to be one of the most suitable marker for genome analysis.